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MRG: modify n simultaneous downloads; update buildutils #154

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@bluegenes bluegenes commented Dec 10, 2024

This PR integrates the changes to BuildUtils (MultiSelection details, minor changes to BuildCollection filtering + writing) that arose from integration into branchwater. It also makes the number of simultaneous downloads tunable, since I was having trouble when using the 3 default permits with large eukaryotic genomes.

It also handles changes associated with zipfile handling from sourmash-bio/sourmash#3431 arising from updating sourmash core to 0.18.0

ref #134

@bluegenes bluegenes changed the title WIP: modify n simultaneous downloads; update buildutils from bw MRG: modify n simultaneous downloads; update buildutils Dec 24, 2024
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ok @ctb this one is ready for review!

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